Readers# cadnano_segments module cadnano_part cadnano_part.__init__() cadnano_part.get_bead() read_json_file() decode_cadnano_part() package_archive() read_model() combineRegionLists() combineCompactRegionLists() polygon_mesh module MayaObj MayaObj.seq_mapping MayaObj.__init__() MayaObj.add() MayaObj.get_position() MayaObj.get_orientation() MayaObj.get_full_name() MayaConnection MayaConnection.__init__() ParseMayaConnection() MayaBase MayaBase.__init__() MayaBase.add_basepair() MayaBase.add_end3() MayaBase.add_end5() parse_maya_file() write_pdb_psf() convert_maya_bases_to_segment_model() segmentmodel_from_cadnano module get_lattice() read_json_file() get_helix_angle() gen_id_series() gen_prop_table() mrdna_model_from_cadnano() segmentmodel_from_lists module find_stacks() basepairs_and_stacks_to_helixmap() set_splines() model_from_basepair_stack_3prime() model_from_pandas() UNIT_circular() segmentmodel_from_oxdna module mrdna_model_from_oxdna() segmentmodel_from_pdb module printv() read_ter_from_pdb() residues_within() find_base_position_orientation() find_basepairs() find_stacks_mdanalysis() basepairs_and_stacks_to_helixmap() get_crossovers() update_helixmap_with_ssdna() break_into_contiguous_groups() get_lists_from_pdb() SegmentModelFromPdb() segmentmodel_from_scadnano module get_helix_dir() gen_id_series() gen_strand() gen_prop_table() mrdna_model_from_scadnano()